iBRAIN Lab Documentation

The iBioinformatics Research in AI and Neuroimaging (iBRAIN) lab is part of the Monash Department of Neuroscience, located at the Alfred Centre. Please find documentation here for using lab resources.

Lab Guides

• iBRAIN XNAT
• Accessing MASSIVE
  • Getting an Account
  • Connecting to MASSIVE
• Data conversion for MRI analysis
  • Large scale conversion to nifti
  • Single image conversion with MRtrix
  • Diffusion MRI conversion
  • Converting compressed DICOM
• Advanced Diffusion MRI
• Lesion Segmentation Tool (LST)
• Quantitive Susceptibility Mapping
  • Overview
  • Steps and theory
• Adding to this documentation
  • Editing RST files and building HTML pages
• Contact
• License